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PRODUCTS

PRECYSE is an HSAFM desktop instrument that enables single molecule visualization and analysis through direct physical imaging of biomolecular samples such as DNA libraries.
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Biomolecule imaging and analysis instrument

The range of potential applications for PRECYSE is huge

Fast and easy workflow

Machine learning NGS QC image software analysis

Initial commercialization of a vastly improved solution for NGS and Synthetic Biology QC, and general replacement for nucleic acid electrophoresis. Longer term clinical applications leveraging previous work around repeat expansion disease and exploring companion diagnostic opportunities.
sample-molecule-imaging

2D/3D Sample Molecule Imaging

Software Molecule Tracing Analysis

Sample Sizing Analysis & Statistics

Frequently asked questions

What is HSAFM and how does it work?
High Speed Atomic Force Microscopy (HSAFM) utilizes an extremely sharp tip (several nm across) attached to a cantilever to raster across an atomically flat surface at high speed, returning a 3D map of biomolecules on the surface with nanoscale resolution. Samples are diluted, mixed with a proprietary buffer and then added and affixed to an atomically flat surface. The HSAFM tip deflection as it moves over surface molecules is detected by a laser vibrometer.
Why is HSAFM so much better than electrophoresis?

(1.) PRECYSE directly images (versus indirect by electrophoresis) and measures 100’s of individual molecules

(2.) Direct imaging offers superior accuracy allowing researchers to:

  • Generating sizing data
  • Visualize secondary structures
  • Visualize sample contaminants
  • Observe other biomolecule phenomena such as protein binding.

(3.) HSAFM is more efficient:

  • Minimal sample requirement (2 µL of 1-50 pg/µL sample)
  • No special cold chain reagents, gels, dyes or sizing ladders needed by electrophoresis.
How are molecules sizes measured?

Evizia’s machine learning software identifies DNA molecule ends, traces the molecule backbone enabling highly accurate sizing.

How many molecules should be analyzed to generate an accurate sizing of the sample?

For quantitative assessment of DNA samples, approximately 100+ molecules should be analyzed to generate an accurate sizing histogram representative of the sample. This varies based on the type of sample being analyzed (gDNA vs short read library).

For example, in the case of ultra-high molecular weight DNA (UHMW), a qualitative assessment of DNA integrity is rapidly achieved by observing larger intact DNA molecules (50 – 100 kbp+) in the sample. For shorter length DNA samples such as Illumina libraries, 500+ molecules are easily observed and accurately measured in 1-2 minutes to generate sizing histograms.

What types of biomolecules can PRECYSE image?

PRECYSE images and analyzes DNA ranging from ~100 bp to 500+ kbp. The software contains built-in analysis options depending on the type and expected size of DNA samples.

Importantly, AFM imaging is based on molecule size, thus proteins such as polymerases, helicases, and CAS9 binding to DNA have all been easily imaged by PRECYSE. RNA can be imaged as well and will be available with the next generation of EVIZIA’s automated software analysis and sizing for RNA samples.

How big is PRECYSE?

PRECYSE is a desktop system measuring 18″ wide x 18″ tall x 24″ deep (45 cm x 45 cm x 61 cm). It weighs ~75 lbs (34 kg), not including the required tower PC and monitor.

Is PRECYSE susceptible to local lab vibrations?

PRECYSE has a built-in vibrational stability system. It should be placed on a stable bench in ambient lab conditions without any major vibrational systems nearby (large centrifuges for example).

No other special lab requirements are needed.

What is the sample throughput of PRECYSE?

Small DNA sizing such as Illumina libraries can be scanned and analyzed in 1-2 minutes, while ultra-high molecular weight DNA (UHMW) gDNA samples can take 6-10 minutes depending on sizing analysis required. Different sizes and types of samples can be processed on a single EZchip, thus throughput can vary depending on the sample types.

Today, PRECYSE currently runs on an 8 plex EZchip consumable. A 16 plex and potentially 48+ plex are being developed. The EZchip is prepared in less than 10 minutes and does not require thawing or room temperature equilibration of cold chain reagents.

What are the detailed performance specifications of PRECYSE for NGS QC?
performance-table